Covalent docking

This webpage provides code, documentation and examples to perform the flexible side chain covalent docking simulations with AutoDock4 using the flexible residue method, as described in the paper:

Covalent docking using autodock: Two-point attractor and flexible side chain methods, Bianco, G., Forli, Forli, S., Goodsell, D., S., Olson, A., J. Protein Science.

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AutoDock Covalent Docking tutorial and script files (5239 downloads)